Исследовательская группа

BioLabs

Материалы

Publications what-where-when

July 11, 2020

Олег Шпынов

Publications what-where-when

Snakemake advanced tutorial

May 6, 2020

Роман Чернятчик

Snakemake advanced tutorial

Анализ данных ChIP-seq: от гистонов к информатическим задачам

February 20, 2020

Олег Шпынов

Анализ данных ChIP-seq: от гистонов к информатическим задачам

Epigenetic regulation

February 13, 2020

Олег Шпынов, Роман Чернятчик

ChromHMM and DNA methylation

Regulation of transcription

Mathematics in Biology

February 5, 2020

Олег Шпынов

Mathematics in Biology

57-fold Throughput Increase and Other Incredible Stories of Native Optimization

December 10, 2019

Алексей Диевский

57-fold Throughput Increase and Other Incredible Stories of Native Optimization

ChIP-Seq processing with snakemake

August 1, 2019

Роман Чернятчик

ChIP-Seq processing with snakemake

Epigenetic regulation and aging

July 31, 2019

Олег Шпынов

Epigenetic regulation and aging

Causal Inference Review

June 27, 2019

Олег Шпынов

Causal Inference Review

Snakemake Workshop

May 29, 2019

Алексей Диевский

Snakemake Workshop

Introduction to DNA Methylation

April 24, 2019

Роман Чернятчик

Introduction to DNA Methylation

Epigenetics analysis practice

April 23, 2019

Олег Шпынов, Роман Чернятчик

Epigenetics analysis practice

Single cell ATAC-Seq processing review

January 16, 2019

Алексей Диевский

Single cell ATAC-Seq processing review

Snakemake Overview

January 14, 2019

Алексей Диевский

Snakemake Overview

NeurIPS 2018 summary

December 19, 2018

Олег Шпынов

NeurIPS 2018 summary

Biata2018 summary

July 30, 2018

Петр Цуринов

Biata2018 summary slides

Talk at Bioinformatics Institute Summer School 2018

July 28, 2018

Олег Шпынов

ChIP-Seq - method for studying epigenetic mechanisms

Talk at JetBrains internal conference

April 13, 2018

Олег Шпынов

JetBrains Research and Aging Studies - What's This All About?

Rule mining and information theory

November 16, 2016

Олег Шпынов

RM and information

Pipeline for epigenomic profiling of several histone marks in aging monocytes

October 20, 2016

Олег Шпынов

Pipeline for epigenomic profiling of several histone marks in aging monocytes

Tensor Methods in Machine Learning

June 6, 2016

Евгений Курбацкий

Tensor Methods in Machine Learning

Rule mining and counter examples

April 13, 2016

Олег Шпынов

Rule mining and counter examples

Predicting TSS using Deep Learning

April 6, 2016

Евгений Курбацкий

Predicting TSS using Deep Learning

NIPS 2015

January 12, 2016

Евгений Курбацкий

NIPS 2015

Talk at Bioinformatics Institute

November 11, 2015

Олег Шпынов

Talk at Bioinformatics Institute

RuleMining2

September 30, 2015

Олег Шпынов

RuleMining2

Models comparison

September 25, 2015

Евгений Курбацкий

Models comparison

Talk at Almazov center

July 22, 2015

Олег Шпынов

Talk at Almazov center

Rule Mininig Applications

March 20, 2015

Олег Шпынов

Rule Mininig Applications

Mathematical methods compendium

March 18, 2015

Алексей Диевский

Mathematical methods compendium

Rule Mininig

November 19, 2014

Олег Шпынов

Rule Mininig

Small RNAs. Micro RNA mechanism review

October 31, 2014

Роман Чернятчик

Small RNAs. Micro RNA mechanism review.

Review on epigenetics and differentiation

October 29, 2014

Олег Шпынов

Review on epigenetics and differentiation

NMF applications for ChIPSeq data. Updated

September 1, 2014

Олег Шпынов

NMF applications for ChIPSeq data. Updated

Bins

August 27, 2014

Анна Атаманова

Bins

NMF applications for ChIPSeq data

July 17, 2014

Олег Шпынов

NMF applications for ChIPSeq data

RNA-Seq Bias Correction

April 10, 2014

Роман Чернятчик

RNA-Seq Bias Correction

RNA-Seq Differential Expression methods evolution

February 27, 2014

Роман Чернятчик

RNA-Seq Differential Expression methods evolution

Discovery and characterization of chromatin states for systematic annotation of the human genome

February 12, 2014

Олег Шпынов

Discovery and characterization of chromatin states for systematic annotation of the human genome

Chip-Seq analysis

January 31, 2014

Евгений Курбацкий

Chip-Seq analysis

Locus-specific editing of histone modifications at endogenous enhancers

January 22, 2014

Олег Шпынов

Locus-specific editing of histone modifications at endogenous enhancers

Epigenetic editing

December 11, 2013

Олег Шпынов

Epigenetic editing

Dynamic and Coordinated Epigenetic Regulation of Developmental Transitions in the Cardiac Lineage

November 29, 2013

Евгений Курбацкий

Dynamic and Coordinated Epigenetic Regulation of Developmental Transitions in the Cardiac Lineage

IMB Topics #2

November 22, 2013

Олег Шпынов

IMB Topics #2

Cufflinks

November 13, 2013

Евгений Курбацкий

Cufflinks

IMB Topics: Regulation of the Stem Cell State

November 6, 2013

Роман Чернятчик

IMB Topics: Regulation of the Stem Cell State

Information criteria

October 28, 2013

Диевский Алексей

Information criteria

DNA Methylation Models

October 23, 2013

Лебедев Сергей

DNA Methylation Models

Bayesian Networks

October 14, 2013

Диевский Алексей

Bayesian Networks

Yandex School of Data Analysis

October 7, 2013

Шпынов Олег

Yandex School of Data Analysis

Dynamic Regulation of Nucleosome Positioning in the Human Genome

April 4, 2013

Роман Чернятчик

Dynamic Regulation of Nucleosome Positioning in the Human Genome

DNA methylation effect on co-transcriptional splicing is dependent on GC-architecture of the exon-intron structure

April 2, 2013

Роман Чернятчик

DNA methylation effect on co-transcriptional splicing is dependent on GC-architecture of the exon-intron structure

JetPoint Meeting

March 6, 2013

Шпынов Олег

JetPoint Meeting